BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A09SP1|AL425625
(166 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1066 291 3e-79
>3x_Contig1066
Length = 4816
Score = 291 bits (145), Expect = 3e-79
Identities = 161/167 (96%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 1 atatatacgccagtatagtgatcaataattttggcccaattgtacttacgaagt-gatat 59
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1159 atatatacgccagtgtagtgatcaataattttggcccaattgtacttacgaagttgatat 1100
Query: 60 ctgaaatctgctgcattgaacctatgakaaaacgtaatckttgcaggaacaaacaaaact 119
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1099 ctgaaatctgctgcattgaacctatgataaaacgtaatctttgcaggaacaaacaaaact 1040
Query: 120 ggtctgtkgttcacaacttgagtgaaatcgtatggcactcctcttat 166
||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 1039 ggtctgttgttcacaacttgagttaaatcgtatggcactcctcttat 993
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 909
Number of Sequences: 1807
Number of extensions: 909
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 166
length of database: 10,358,551
effective HSP length: 15
effective length of query: 151
effective length of database: 10,331,446
effective search space: 1560048346
effective search space used: 1560048346
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (98.8 bits)